Document Actions
BIOCOMP'06: June 28, 2006 Schedule
Last modified
2006-06-03 18:34
To select a different day  CLICK HERE
|
6:30am - 5:00pm: Registration (Second Floor, Conference Lobby: 1-5)
SESSION 5-BIOCOMP: METABLOMICS, PROTEOMIC AND PROTEIN FUNCTION PREDICTION
Chairs: Dr. Jack Y. Yang* and Dr. Mary Qu Yang**
*Harvard University, Harvard Medical School, USA
**National Institutes of Health (NIH), USA and Purdue University, USA
June 28, 2006 (Wednesday); 8:20am - 9:20am
(LOCATION: Meeting Room 3)
08:20 - 08:40am: Learning from Sequences with Determining Correlation
Between Transmembrane and Protein Disorder
Jack Y. Yang* and Mary Qu Yang**/***
*Harvard University, Harvard Medical School, USA
**National Human Genome Research Institute - National Institutes of Health (NIH), USA
***Purdue University, USA
08:40 - 09:00am: X-Ray Powder Diffraction Metrics
George Runger, Kelly Canter, John Twist, and David Rossi
Arizona State University, USA
Pfizer Inc., USA
Mylan Laboratory, USA
09:00 - 09:20am: A Simple Approach for Obtaining High Resolution, High
Sensitivity H NMR Metabolite Spectra of Biofluids with
Limited Mass Supply
Jian Zhi Hu, Donald N. Rommereim, Robert A. Wind, Kevin Minard,
and Jesse A. Sears
Pacific Northwest National Laboratory, Washington, USA
SESSION 6-BIOCOMP: SEQUENCE AND STRUCTURE ALIGNMENT OF MACRO MOLECULES
Chairs: Dr. Hong Zhou* and Dr. Hikmet Budak**
*Saint Joseph College, CT, USA
**Sabanci University, Istanbul, Turkey
June 28, 2006 (Wednesday); 9:20am - 10:20am
(LOCATION: Meeting Room 3)
09:20 - 09:40am: Protein Structure Alignment Using Backbone Torsion Angles
Xijiang Miao, Michael G. Bryson, Homayoun Valafar
University of South Carolina, Columbia, SC, USA
09:40 - 10:00am: Space-Efficient Parallel Algorithms for the Constrained
Multiple Sequence Alignment Problem
Dan Hey and Abdullah N. Arslan
University of Vermont, USA
10:00 - 10:20am: Simple Methods of Finding Short Protein Coding Sequences
Using Multiple Species Alignments
Hanno Hinsch and Artemis Hatzigeorgiou
University of Pennsylvania, USA
10:20 - 10:40am: BREAK
SESSION 7-BIOCOMP: GENE IDENTIFICATION AND CLUSTERING
Chairs: Prof. John R. Rose* and Dr. Hikmet Budak**
*University of South Carolina, Columbia, SC, USA
**Sabanci University, Istanbul, Turkey
June 28, 2006 (Wednesday); 10:40am - 12:00pm
(LOCATION: Meeting Room 3)
10:40 - 11:00am: A Heuristic Approach to Scoring Gene Clustering Algorithms
Longde Yin and Chun-Hsi Huang
University of Connecticut, Storrs, USA
11:00 - 11:20am: Finishing Repetitive Regions Automatically with Dupfinisher
Cliff S. Han and Patrick Chain
University of California / Los Alamos National Laboratory, USA
University of California / Lawrence Livermore National Lab, USA
11:20 - 11:40am: Acceleration of Covariance Models for Non-coding RNA Search
Scott F. Smith
Boise State University, USA
11:40 - 12:00pm: VBI Genome Annotation and Comparison System
Jing Zhao, Tian Xue, Boyu Yang, Kelly Williams, Rebecca Wattam,
Rebecca Will, Bruce Sharp, Ronald Kenyon, Oswald Crasta,
and Bruno W. Sobral
Virginia Bioinformatics Institute, Virginia Tech, USA
12:00 - 01:20pm: LUNCH (On Your Own)
01:20 - 02:40pm: Note: There are a number of other sessions (not listed
here) that are of significant interest to BIOCOMP conference
participants (sessions belonging to other joint conferences in
this event.) Therefore, you are encouraged to also check the
schedules for other joint conferences. (In particular,
schedules for PDPTA'06, ICAI'06, MLMTA'06, IPCV'06, DMIN'06,
and IKE'06).
02:40 - 03:20pm: DISCUSSION SESSION C-BIOCOMP (Refreshments will be available)
June 28 (Wednesday)
(LOCATION: Hallways - Meeting Rooms 1-5)
List of papers appears at the end of BIOCOMP's schedule.
03:20 - 06:00pm: Note: There are a number of other sessions (not listed
here) that are of significant interest to BIOCOMP conference
participants (sessions belonging to other joint conferences in
this event.) Therefore, you are encouraged to also check the
schedules for other joint conferences. (In particular,
schedules for PDPTA'06, ICAI'06, MLMTA'06, IPCV'06, DMIN'06,
and IKE'06).
06:00 - 9:00pm: TWO TUTORIALS (planned)
CONFERENCE TUTORIAL E
Java Cryptography
Prof. Ray Kresman
Bowling Green State University, Ohio, USA
June 28, 2006 (Wednesday)
(LOCATION: Meeting Room 1)
CONFERENCE TUTORIAL F
Developing Enterprise Web Services and Applications
Dr. Sandeep Chatterjee
Chief Executive Officer, Cyndeo LLC, USA
June 28, 2006 (Wednesday)
(LOCATION: Meeting Room 3)
| DISCUSSION SESSION |
DISCUSSION SESSION C-BIOCOMP
June 28 (Wednesday), 2006
RRR/SRP/PST Papers
02:40 - 03:20pm
(LOCATION: Hallways/Lobby - Meeting Rooms 1-5)
LIST OF PAPERS IN DISCUSSION SESSION C-BIOCOMP:
O. Petri Net Based Model Of The T Cell Receptor Signaling Pathway
Srinidhi Jayasuryan, Anil Bamezai, Vijay Gehlot
Villanova University, Villanova, PA, USA
O. Data Integration with Biopax Pathway Datasets for Automated Navigation
Keyuan Jiang
Purdue University Calumet, USA
O. New Algorithms for Application of Evolution Rules based on
Applicability Benchmarks
Luis Fernandez, Fernando Arroyo, Juan Castellanos, Jorge A. Tejedor
and Ivan Garcia
Universidad Politecnica de Madrid, Spain
O. Filtering Tandem Repeats in DNA Sequences
Dina Sokol and Justin Tojeira
City University of New York, USA
O. Fast and Complete Search of sirna Off-target Sequences
Hong Zhou*, Yufang Wang**, and Xiao Zeng***
*Saint Joseph College, USA
**University of Southern Mississippi, USA
***Superarray Bioscience Corporation, USA
O. A Machine Learning Prototype for the Identification of Patients
Who Are Not Likely To Respond To Medical Treatment of BPH With
alpha-Blockers
Baris Andirinli, Ali Tekin, Yasin Kapucu, I. Ilkay Boduroglu
Istanbul Technical University, Istanbul, Turkey
Haydarpasa Numune Training and Research Hospital, Turkey
O. Basic Reproductive Rate of a Spatial Epidemic Seir Model
using Computer Algebra Software
Sebastian Guzman D. and Juan F. Ospina G.
EAFIT University, Colombia
|
To select a different day CLICK HERE
|